Ped_Pop is a C program for combining genotype imputation from GIGI and Beagle, or other pairs of genotype imputation approaches that are based on pedigree and population-based methods. For more details see the paper: Saad and Wijsman (2014) "Combining family- and population-based imputation data for association analysis of rare and common variants in large pedigrees" Genetic Epidemiology, 38:579-590.

Availability: Ped_Pop is available for download here: